SubtiBank SubtiBank
yrhG [2019-06-12 09:31:19]
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yrhG [2019-06-12 09:31:19]

similar to formate transporter
locus
BSU27200
pI
9.46
mw
28.34 kDa
protein length
266 aa Sequence Blast
gene length
801 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,779,462 → 2,780,262

    The protein

    Paralogous protein(s)

  • [protein|5FB51BA52819AEB4E6408A096B107ACB533C611A|YwcJ]

    • Structure

  • [PDB|3KLY] (from Vibrio cholerae, 33% identity) [pubmed|20010838]

    • Expression and Regulation

    Operons

    genes
    [gene|FA18A10769974D392247FB32A0891AE74DF248A0|yrhG]
    description
    [Pubmed|21815947]

    additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|yrzI]' and '[protein|search|yrhG]' [PubMed|20525796]
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    Biological materials

    Mutant

  • MGNA-A148 (yrhG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/148 NBRP B. subtilis, Japan]
  • BKE27200 (Δ[gene|FA18A10769974D392247FB32A0891AE74DF248A0|yrhG]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATAAAACGCCTCCATT, downstream forward: _UP4_TGACCAACGGGCAAATCCAT
  • BKK27200 (Δ[gene|FA18A10769974D392247FB32A0891AE74DF248A0|yrhG]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAATAAAACGCCTCCATT, downstream forward: _UP4_TGACCAACGGGCAAATCCAT

    • References

  • 20525796,21815947,20010838